ESP map of HIV-1 SL2 RNA bound NC


The electrostatic potential surface of HIV-1 nucleocapsid protein bound to SL2 RNA (PDB ID:  1F6U). Units are in kT/e (T=300K). Sulfur atoms from the two zinc knuckles are shown as white spheres. Calculations were performed using the PM3 Hamiltonian and a buffer/matrix cutoff of 8/9 Å.