York Group Research Interests

The focus of our group is to develop and apply new theoretical methods to study biological macromolecules in solution. Methodological developments in the lab include new quantum mechanical (electronic structure) methods, in addition to novel molecular simulation techniques and new generation force fields that include many-body effects. At the interface of these methods are hybrid quantum mechanical/molecular mechanical (QM/MM) methods for studying detailed chemical reactions of biological macromolecules in solution. The application focus in the lab is directed towards challenging problems involving ionic biosystems including metal ion catalysis, phosphate hydrolysis reactions, and protein-nucleotide interactions that are beyond the scope of conventional empirical force fields.

Solvation

Density-functional theory

Hybrid QM/MM

Molecular simulation

Linear-scaling electronic structure

Ab Initio


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